Westerdijk Fungal Genomics
Area of Expertise: BioinformaticsMulti-omicsSequencingAccess: For Dutch and/or international academic partnersResearch Orientation: Data research
From fungal genome sequencing to tailor-made genome analyses.
Our expertise in fungal genome sequencing and genome analyses provides support for:
- Fungal genomic DNA extraction and Oxford Nanopore Technology de novo sequencing and genome assembly (including quality control).
- Gene prediction and functional annotation of fungal genomes.
- Tailored-made (comparative) genomic analyses (e.g. evaluation of the mycotoxigenic potential of fungal strains, phylogenomics, identification of genes of interest).
For the analyses of fungal genomes, tell us your specific need as we can employ diverse tools to address different questions.
Let’s connect!
Jerome Collemarej.collemare@wi.knaw.nlAffiliate/Organisation:
Visiting address:Uppsalalaan 83584 CT Utrecht
Visiting address:Uppsalalaan 83584 CT UtrechtFacility features:
MinION sequencing
Typical users are companies or academic labs with limited expertise in fungal genomes and with very specific questions (e.g. can this fungus produce this type of enzyme?).